Quick overview:

Brief notes will be posted weekly on the side bar. We will be going over AFNI first and then ANTsR. After that we will open up to other content areas. Sessions will be recorded and links provided below when they become available. The planned schedule is not set in stone and can/will be adapted to group interests.

Session Structure:

People are welcome to ask questions as we go. I will also stop the recording and take questions at the end for those who may not want to be recorded. Each session, I will have a planned set of topics, I will modify the session pages to reflect what was covered once we have finished a session.

The zoom link is: Zoom 2025

I will provide a link in the zoom meeting for email notifications regarding classes. I will also add any schedule adjustments to this page.

The current TOC:

• AFNI class 1: dicoms and dcm2niix [10/20/2025]
• AFNI class 2: afni_proc.py: setup
• AFNI class 3: afni_proc.py: walk through
• AFNI class 4: afni_proc.py: resting & NL
• AFNI class 5: regression
• AFNI class 6: regression
• AFNI class 7: clustering
• AFNI class 8: group analysis
• AFNI class 9: figures
• AFNI class 10: getting into R
• AFNI class 11: connectivity [skipping?]
• ANTs class 1: build template [skipping?]
• ANTsR class 2: ANTsR segmentation and cortical thickness
• ANTsR class 3: ANTsR functional imaging example
• ANTsR class 4: ANTsR igraph example
• Clustering [skipping?]